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“Diffusion in a quasi-one-dimensional system on a periodic substrate”. Carvalho JCN, Nelissen K, Ferreira WP, Farias GA, Peeters FM, Physical review : E : statistical, nonlinear, and soft matter physics 85, 021136 (2012). http://doi.org/10.1103/PhysRevE.85.021136
Abstract: The diffusion of charged particles interacting through a repulsive Yukawa potential, exp(-r/lambda)/r, confined by a parabolic potential in the y direction and subjected to a periodic substrate potential in the x direction is investigated. Langevin dynamic simulations are used to investigate the effect of the particle density, the amplitude of the periodic substrate, and the range of the interparticle interaction potential on the diffusive behavior of the particles. We found that in general the diffusion is suppressed with increasing the amplitude of the periodic potential, but for specific values of the strength of the substrate potential a remarkable increase of the diffusion is found with increasing the periodic potential amplitude. In addition, we found a strong dependence of the diffusion on the specific arrangement of the particles, e. g., single-chain versus multichain configuration. For certain particle configurations, a reentrant behavior of the diffusion is found as a function of the substrate strength due to structural transitions in the ordering of the particles.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 9
DOI: 10.1103/PhysRevE.85.021136
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“Diffusion of interacting particles in discrete geometries: Equilibrium and dynamical properties”. Becker T, Nelissen K, Cleuren B, Partoens B, Van den Broeck C, Physical review : E : statistical, nonlinear, and soft matter physics 90, 052139 (2014). http://doi.org/10.1103/PhysRevE.90.052139
Abstract: We expand on a recent study of a lattice model of interacting particles [Phys. Rev. Lett. 111, 110601 (2013)]. The adsorption isotherm and equilibrium fluctuations in particle number are discussed as a function of the interaction. Their behavior is similar to that of interacting particles in porous materials. Different expressions for the particle jump rates are derived from transition-state theory. Which expression should be used depends on the strength of the interparticle interactions. Analytical expressions for the self-and transport diffusion are derived when correlations, caused by memory effects in the environment, are neglected. The diffusive behavior is studied numerically with kinetic Monte Carlo (kMC) simulations, which reproduces the diffusion including correlations. The effect of correlations is studied by comparing the analytical expressions with the kMC simulations. It is found that the Maxwell-Stefan diffusion can exceed the self-diffusion. To our knowledge, this is the first time this is observed. The diffusive behavior in one-dimensional and higher-dimensional systems is qualitatively the same, with the effect of correlations decreasing for increasing dimension. The length dependence of both the self-and transport diffusion is studied for one-dimensional systems. For long lengths the self-diffusion shows a 1/L dependence. Finally, we discuss when agreement with experiments and simulations can be expected. The assumption that particles in different cavities do not interact is expected to hold quantitatively at low and medium particle concentrations if the particles are not strongly interacting.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 8
DOI: 10.1103/PhysRevE.90.052139
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“Structure, normal mode spectra, and mixing of a binary system of charged particles confined in a parabolic trap”. Ferreira WP, Munarin FF, Nelissen K, Costa RN, Peeters FM, Farias GA, Physical review : E : statistical, nonlinear, and soft matter physics 72, 021406 (2005). http://doi.org/10.1103/PhysRevE.72.021406
Abstract: We study the mixing of two different kinds of particles, having different charge and/or mass, interacting through a pure Coulomb potential, and confined in a parabolic trap. The structure of the cluster and its normal mode spectrum are analyzed as a function of the ratio of the charges (mass ratio) of the two types of particles. We show that particles are not always arranged in a shell structure. Mixing of the particles goes hand in hand with a large number of metastable states. The normal modes of the system are obtained, and we find that some of the special modes can be tuned by varying the ratio between the charges (masses) of the two species. The degree of mixing of the two type of particles is summarized in a phase diagram, and an order parameter that describes quantitatively the mixing between particles is defined.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 25
DOI: 10.1103/PhysRevE.72.021406
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“Transition from single-file to two-dimensional diffusion of interacting particles in a quasi-one-dimensional channel”. Lucena D, Tkachenko DV, Nelissen K, Misko VR, Ferreira WP, Farias GA, Peeters FM, Physical review : E : statistical, nonlinear, and soft matter physics 85, 031147 (2012). http://doi.org/10.1103/PhysRevE.85.031147
Abstract: Diffusive properties of a monodisperse system of interacting particles confined to a quasi-one-dimensional channel are studied using molecular dynamics simulations. We calculate numerically the mean-squared displacement (MSD) and investigate the influence of the width of the channel (or the strength of the confinement potential) on diffusion in finite-size channels of different shapes (i.e., straight and circular). The transition from single-file diffusion to the two-dimensional diffusion regime is investigated. This transition [ regarding the calculation of the scaling exponent (alpha) of the MSD <Delta x(2)(t)> proportional to t(alpha)] as a function of the width of the channel is shown to change depending on the channel's confinement profile. In particular, the transition can be either smooth (i.e., for a parabolic confinement potential) or rather sharp (i.e., for a hard-wall potential), as distinct from infinite channels where this transition is abrupt. This result can be explained by qualitatively different distributions of the particle density for the different confinement potentials.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 38
DOI: 10.1103/PhysRevE.85.031147
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“Structural ordering of self-assembled clusters with competing interactions : transition from faceted to spherical clusters”. Galvan Moya JE, Nelissen K, Peeters FM, Langmuir: the ACS journal of surfaces and colloids 31, 917 (2015). http://doi.org/10.1021/la504249e
Abstract: The self-assembly of nanoparticles into clusters and the effect of the different parameters of the competing interaction potential on it are investigated. For a small number of particles, the structural organization of the clusters is almost unaffected by the attractive part of the potential, and for an intermediate number of particles the configuration strongly depends on the strength of it. The cluster size is controlled by the range of the interaction potential, and the structural arrangement is guided by the strength of the potential: i.e., the self-assembled cluster transforms from a faceted configuration at low strength to a spherical shell-like structure at high strength. Nonmonotonic behavior of the cluster size is found by increasing the interaction range. An approximate analytical expression is obtained that predicts the smallest cluster for a specific set of potential parameters. A Mendeleev-like table is constructed for different values of the strength and range of the attractive part of the potential in order to understand the structural ordering of the ground-state configuration of the self-assembled clusters.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 3.833
Times cited: 4
DOI: 10.1021/la504249e
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“Dynamics of topological defects and the effects of the cooling rate on finite-size two-dimensional screened Coulomb clusters”. Nelissen K, Partoens B, Peeters FM, Europhysics letters 79, 66001 (2007). http://doi.org/10.1209/0295-5075/79/66001
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 1.957
Times cited: 9
DOI: 10.1209/0295-5075/79/66001
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“Induced order and re-entrant melting in classical two-dimensional binary clusters”. Nelissen K, Partoens B, Schweigert I, Peeters FM, Europhysics letters 74, 1046 (2006). http://doi.org/10.1209/epl/i2006-10044-6
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 1.957
Times cited: 17
DOI: 10.1209/epl/i2006-10044-6
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“Work and dissipation in 2D clusters”. Nelissen K, Partoens B, van den Broeck C, Europhysics letters 88, 30001 (2009). http://doi.org/10.1209/0295-5075/88/30001
Abstract: We show by extensive numerical simulations, that far-from-equilibrium experiments on dusty plasmas and on dipole particles in a circular cavity are good candidates for the verification of the Jarzynski equality, the Crooks relation and, to a lesser extent, of the recently obtained microscopic expression for the dissipated work.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 1.957
Times cited: 2
DOI: 10.1209/0295-5075/88/30001
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“Diffusion of interacting particles in discrete geometries”. Becker T, Nelissen K, Cleuren B, Partoens B, van den Broeck C, Physical review letters 111, 110601 (2013). http://doi.org/10.1103/PhysRevLett.111.110601
Abstract: We evaluate the self-diffusion and transport diffusion of interacting particles in a discrete geometry consisting of a linear chain of cavities, with interactions within a cavity described by a free-energy function. Exact analytical expressions are obtained in the absence of correlations, showing that the self-diffusion can exceed the transport diffusion if the free-energy function is concave. The effect of correlations is elucidated by comparison with numerical results. Quantitative agreement is obtained with recent experimental data for diffusion in a nanoporous zeolitic imidazolate framework material, ZIF-8.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 8.462
Times cited: 22
DOI: 10.1103/PhysRevLett.111.110601
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“Reentrant melting of a classical two-dimensional binary cluster”. Nelissen K, Heytens L, Schweigert VA, Peeters FM, AIP conference proceedings 799, 347 (2005)
Abstract: A system of classical charged particles interacting through a dipole repulsive potential, which are confined in a two-dimensional hardwall trap, is studied. The cluster consists of 16 particles, together with 4 defect particles. The technique of Brownian dynamics is used to simulate experimental binary colloidal systems [1]. The melting properties and the reentrant behavior of the system, which was studied before for clusters of identical particles [2], are studied for the binary mixture. The defect particles, which have a smaller charge than the other particles, stabilize the cluster, melt at a higher value of the coupling parameter F as compared to the other particles and have a strong influence on the melting properties of the other particles.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
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“Bubble, stripe, and ring phases in a two-dimensional cluster with competing interactions”. Nelissen K, Partoens B, Peeters FM, Physical review : E : statistical physics, plasmas, fluids, and related interdisciplinary topics 71, 066204 (2005). http://doi.org/10.1103/PhysRevE.71.066204
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 30
DOI: 10.1103/PhysRevE.71.066204
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“Hysteresis and reentrant melting of a self-organized system of classical particles confined in a parabolic trap”. Munarin FF, Nelissen K, Ferreira WP, Farias GA, Peeters FM, Physical review : E : statistical physics, plasmas, fluids, and related interdisciplinary topics 77, 031608 (2008). http://doi.org/10.1103/PhysRevE.77.031608
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 11
DOI: 10.1103/PhysRevE.77.031608
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“Influence of a defect particle on the structure of a classical two-dimensional cluster”. Nelissen K, Partoens B, Peeters FM, Physical review : E : statistical physics, plasmas, fluids, and related interdisciplinary topics 69, 046605 (2004). http://doi.org/10.1103/PhysRevE.69.046605
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 27
DOI: 10.1103/PhysRevE.69.046605
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“Influence of an ellipsoid on the angular order in a two-dimensional cluster”. Nelissen K, Partoens B, Peeters FM, Physical review : E : statistical physics, plasmas, fluids, and related interdisciplinary topics 84, 031405 (2011). http://doi.org/10.1103/PhysRevE.84.031405
Abstract: The influence of an ellipsoid on the angular order of two-dimensional classical clusters is investigated through Brownian dynamics simulations. We found the following: (1) The presence of an ellipsoid does not influence the start of the angular melting, but reduces the rate at which the inner rings can rotate with respect to each other. (2) Even a small eccentricity of the ellipsoid leads to a stabilization of the angular order of the system. (3) Depending on the position of the ellipsoid in the cluster, a reentrant behavior in the angular order is observed before full radial melting of the cluster sets in. (4) The ellipsoid can lead to a two-step angular melting process: First, the rotation of the inner rings with respect to each other is hindered by the ellipsoid, but on further increasing the kinetic energy of the system, the ellipsoid just starts to behave as a spherical particle with different mobility. The effect of an ellipsoid on the molten system does not depend crucially on the interparticle interaction, but a softer parabolic confinement reduces the angular stabilization.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
DOI: 10.1103/PhysRevE.84.031405
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“Spectrum of classical two-dimensional Coulomb clusters”. Nelissen K, Matulis A, Partoens B, Kong M, Peeters FM, Physical review : E : statistical physics, plasmas, fluids, and related interdisciplinary topics 73, 016607 (2006). http://doi.org/10.1103/PhysRevE.73.016607
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 33
DOI: 10.1103/PhysRevE.73.016607
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“Structure of binary colloidal systems confined in a quasi-one-dimensional channel”. Yang W, Nelissen K, Kong M, Zeng Z, Peeters FM, Physical review : E : statistical physics, plasmas, fluids, and related interdisciplinary topics 79, 041406 (2009). http://doi.org/10.1103/PhysRevE.79.041406
Abstract: The structural properties of a binary colloidal quasi-one-dimensional system confined in a narrow channel are investigated through modified Monte Carlo simulations. Two species of particles with different magnetic moment interact through a repulsive dipole-dipole force are confined in a quasi-one-dimensional channel. The impact of three decisive parameters (the density of particles, the magnetic-moment ratio, and the fraction between the two species) on the transition from disordered phase to crystal-like phases and the transitions among the different mixed phases are summarized in a phase diagram.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 11
DOI: 10.1103/PhysRevE.79.041406
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“Using self-driven microswimmers for particle separation”. Yang W, Misko VR, Nelissen K, Kong M, Peeters FM, Soft matter 8, 5175 (2012). http://doi.org/10.1039/c2sm07382j
Abstract: Microscopic self-propelled swimmers capable of autonomous navigation through complex environments provide appealing opportunities for localization, pick-up and delivery of micro and nanoscopic objects. Inspired by motile cells and bacteria, man-made microswimmers have been fabricated, and their motion in patterned surroundings has been experimentally studied. We propose to use self-driven artificial microswimmers for the separation of binary mixtures of colloids. We revealed different regimes of separation, including one with a velocity inversion. Our findings could be of use for various biological and medical applications.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 3.889
Times cited: 45
DOI: 10.1039/c2sm07382j
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“Current fluctuations in boundary driven diffusive systems in different dimensions : a numerical study”. Becker T, Nelissen K, Cleuren B, New journal of physics 17, 055023 (2015). http://doi.org/10.1088/1367-2630/17/5/055023
Abstract: We use kinetic Monte Carlo simulations to investigate current fluctuations in boundary driven generalized exclusion processes, in different dimensions. Simulation results are in full agreement with predictions based on the additivity principle and the macroscopic fluctuation theory. The current statistics are independent of the shape of the contacts with the reservoirs, provided they are macroscopic in size. In general, the current distribution depends on the spatial dimension. For the special cases of the symmetric simple exclusion process and the zero-range process, the current statistics are the same for all spatial dimensions.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 3.786
Times cited: 5
DOI: 10.1088/1367-2630/17/5/055023
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“Melting properties of two-dimensional multi-species colloidal systems in a parabolic trap”. Yang W, Nelissen K, Kong MH, Li YT, Tian YM, European physical journal : B : condensed matter and complex systems 83, 499 (2011). http://doi.org/10.1140/epjb/e2011-20595-9
Abstract: The angular and radial melting properties of two-dimensional classical systems consisting of different types of particles confined in a parabolic trap are studied through modified Monte Carlo simulations. A universal behavior of the angular melting process is found, which occurs in multiple steps due to shell depended melting temperatures. The melting sequence of the different shells is determined by two major factors: (1) the confinement strength which each shell is subjected to, and (2) the specific structure of each shell. Further, a continuous radial disordering of the particle types forming a single circular shell is found and analyzed. This phenomenon has never been observed before in two-dimensional mono-dispersive systems. This continuous radial disordering results from the high energy barrier between different particle types in multi-species systems.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 1.461
Times cited: 2
DOI: 10.1140/epjb/e2011-20595-9
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“Quantum diffusion: A simple, exactly solvable model”. Magnus W, Nelissen K, Physica: A : theoretical and statistical physics 417, 96 (2015). http://doi.org/10.1016/j.physa.2014.09.041
Abstract: We propose a simple quantum mechanical model describing the time dependent diffusion current between two fermion reservoirs that were initially disconnected and characterized by different densities or chemical potentials. The exact, analytical solution of the model yields the transient behavior of the coupled fermion systems evolving to a final steady state, whereas the long-time behavior is determined by a power law rather than by exponential decay. Similar results are obtained for the entropy production which is proportional to the diffusion current. (C) 2014 Elsevier B.V. All rights reserved.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.243
DOI: 10.1016/j.physa.2014.09.041
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“Self-organization of highly symmetric nanoassemblies : a matter of competition”. Galván-Moya JE, Altantzis T, Nelissen K, Peeters FM, Grzelczak M, Liz-Marán LM, Bals S, Van Tendeloo G, ACS nano 8, 3869 (2014). http://doi.org/10.1021/nn500715d
Abstract: The properties and applications of metallic nanoparticles are inseparably connected not only to their detailed morphology and composition but also to their structural configuration and mutual interactions. As a result, the assemblies often have superior properties as compared to individual nanoparticles. Although it has been reported that nanoparticles can form highly symmetric clusters, if the configuration can be predicted as a function of the synthesis parameters, more targeted and accurate synthesis will be possible. We present here a theoretical model that accurately predicts the structure and configuration of self-assembled gold nanoclusters. The validity of the model is verified using quantitative experimental data extracted from electron tomography 3D reconstructions of different assemblies. The present theoretical model is generic and can in principle be used for different types of nanoparticles, providing a very wide window of potential applications.
Keywords: A1 Journal article; Engineering sciences. Technology; Electron microscopy for materials research (EMAT); Condensed Matter Theory (CMT)
Impact Factor: 13.942
Times cited: 34
DOI: 10.1021/nn500715d
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“Adsorption and desorption in confined geometries : a discrete hopping model”. Becker T, Nelissen K, Cleuren B, Partoens B, Van den Broeck C, The European physical journal. Special topics 223, 3243 (2014). http://doi.org/10.1140/epjst/e2014-02330-8
Abstract: We study the adsorption and desorption kinetics of interacting particles moving on a one-dimensional lattice. Confinement is introduced by limiting the number of particles on a lattice site. Adsorption and desorption are found to proceed at different rates, and are strongly influenced by the concentration-dependent transport diffusion. Analytical solutions for the transport and self-diffusion are given for systems of length 1 and 2 and for a zero-range process. In the last situation the self- and transport diffusion can be calculated analytically for any length.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 1.862
Times cited: 4
DOI: 10.1140/epjst/e2014-02330-8
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“Single-file diffusion of interacting particles in a one-dimensional channel”. Nelissen K, Misko VR, Peeters FM, Epl 80, 56004 (2007). http://doi.org/10.1209/0295-5075/80/56004
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 1.957
Times cited: 48
DOI: 10.1209/0295-5075/80/56004
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“Structural transitions in vertically and horizontally coupled parabolic channels of Wigner crystals”. Galván Moya JE, Nelissen K, Peeters FM, Physical review : B : condensed matter and materials physics 86, 184102 (2012). http://doi.org/10.1103/PhysRevB.86.184102
Abstract: Structural phase transitions in two vertically or horizontally coupled channels of strongly interacting particles are investigated. The particles are free to move in the x direction but are confined by a parabolic potential in the y direction. They interact with each other through a screened power-law potential (r(-n)e(-r/lambda)). In vertically coupled systems, the channels are stacked above each other in the direction perpendicular to the (x, y) plane, while in horizontally coupled systems both channels are aligned in the confinement direction. Using Monte Carlo (MC) simulations we obtain the ground-state configurations and the structural transitions as a function of the linear particle density and the separation between the channels. At zero temperature, the vertically coupled system exhibits a rich phase diagram with continuous and discontinuous transitions. On the other hand, the horizontally coupled system exhibits only a very limited number of phase transitions due to its symmetry. Further, we calculated the normal modes for the Wigner crystals in both cases. From MC simulations, we found that in the case of vertically coupled systems, the zigzag transition is only possible for low densities. A Ginzburg-Landau theory for the zigzag transition is presented, which predicts correctly the behavior of this transition from which we interpret the structural phase transition of the Wigner crystal through the reduction of the Brillouin zone.
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 3.836
Times cited: 6
DOI: 10.1103/PhysRevB.86.184102
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“Comment on “Generalized exclusion processes : transport coefficients””. Becker T, Nelissen K, Cleuren B, Partoens B, Van den Broeck C, Physical review E 93, 046101 (2016). http://doi.org/10.1103/PHYSREVE.93.046101
Abstract: In a recent paper, Arita et al. [Phys. Rev. E 90, 052108 (2014)] consider the transport properties of a class of generalized exclusion processes. Analytical expressions for the transport-diffusion coefficient are derived by ignoring correlations. It is claimed that these expressions become exact in the hydrodynamic limit. In this Comment,we point out that (i) the influence of correlations upon the diffusion does not vanish in the hydrodynamic limit, and (ii) the expressions for the self- and transport diffusion derived by Arita et al. are special cases of results derived in Becker et al. [Phys. Rev. Lett. 111, 110601 (2013)].
Keywords: A1 Journal article; Condensed Matter Theory (CMT)
Impact Factor: 2.366
Times cited: 3
DOI: 10.1103/PHYSREVE.93.046101
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