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Camuffo, D.; Pagan, E.; Schellen, H.; Van Grieken, R.; Bencs, L.; et al. |
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Church heating and cultural heritage conservation : guide to the analysis of pros and cons of various heating systems |
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MA2 Book as author |
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2006 |
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240 p. |
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MA2 Book as author; AXES (Antwerp X-ray Analysis, Electrochemistry and Speciation) |
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88-370-5034-8 |
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UA @ admin @ c:irua:117468 |
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7665 |
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Swerling, G.; Travaglini, B.; Van Grieken, R.; Spolnik, Z.; Bencs, L.; [et al.]; European Project Freindly-Heating |
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Il riscaldamento nelle chiese e la conservazione dei beni culturali = Church heating and the preservation of the cultural heritage |
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ME2 Book as editor or co-editor |
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2006 |
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240 p. |
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ME2 Book as editor or co-editor; AXES (Antwerp X-ray Analysis, Electrochemistry and Speciation) |
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UA @ admin @ c:irua:61684 |
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8480 |
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Van der Paal, J. |
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Generation, transport and molecular interactions of reactive species in plasma medicine |
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Doctoral thesis |
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2019 |
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237 p. |
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Doctoral thesis; Plasma Lab for Applications in Sustainability and Medicine – Antwerp (PLASMANT) |
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UA @ admin @ c:irua:162591 |
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6297 |
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Peeters, F.M.; Partoens, B.; Kong, M. |
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The classical electron gas in artificial structures |
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P3 Proceeding |
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2004 |
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235-250 |
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P3 Proceeding; Condensed Matter Theory (CMT) |
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IOS Press |
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Amsterdam |
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0000-00-00 |
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UA @ lucian @ c:irua:62457 |
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365 |
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Ramakers, M. |
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Using a gliding arc plasmatron for CO2 conversion : the future in industry? |
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Doctoral thesis |
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2019 |
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235 p. |
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Doctoral thesis; Engineering sciences. Technology; Plasma Lab for Applications in Sustainability and Medicine – Antwerp (PLASMANT) |
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UA @ admin @ c:irua:158254 |
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5282 |
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Daems, E. |
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Shaping up oligonucleotides : aptamer-target recognition investigated by native mass spectrometry |
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Doctoral thesis |
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2021 |
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235 p. |
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Doctoral thesis; AXES (Antwerp X-ray Analysis, Electrochemistry and Speciation) |
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Aptamers are short, synthetic DNA or RNA molecules that are characterized by a specific 3D conformation which enables specific target recognition. Aptamers are promising tools in many application fields from sensing to therapeutics. One of the major challenges in the aptamer field is understanding the relationship between the sequence and what determines the higher-order structure and specific interactions with targets. Therefore, this PhD thesis focuses on the use of different mass spectrometry (MS) based approaches to characterize aptamers and their interactions. Several of these approaches are already widely applied to study other biomolecules, such as proteins, but are still largely unexplored for aptamers and oligonucleotides in general. A first focus was put on obtaining information on the higher-order structure and conformational stability of aptamers using a combination of MS and with ion mobility (IM) spectrometry by performing collision-induced unfolding (CIU) experiments. CIU was shown to hold great promise to analyze the conformational dynamics and gas-phase stabilities of aptamers. Next, the capabilities and limitations of native IM-MS for the analysis of noncovalent interactions of aptamers were demonstrated. The conformational behavior and interactions of cocaine-binding aptamers were studied and it was found that relative binding affinities of aptamers that only differ slightly in sequence and structure can be determined using native MS. Moreover, native IM-MS allowed the detection of small conformational changes upon binding of a target, which were found to be dependent on the binding mode of the aptamer. An adaptive binding mechanism was suggested for flexible aptamers that require more reorganization upon binding. In the final part of this thesis, the importance of thoroughly characterizing and validating aptamer-target interactions before using them in an application was emphasized. Moreover, the gathered insights were applied in our own development of a proof-of-concept aptamer-based sensor. This was shown by investigating the interactions of ampicillin aptamers which were found to not bind the target they were selected for in the first place. A multi-analytical approach combining complementary techniques was used for this purpose since no single technique is generally applicable to characterize all aptamers and their interactions and to obtain a comprehensive picture of the aptamer-target interactions. Furthermore, such multi-analytical approach was used to characterize a testosterone-binding aptamer while developing an aptamer-based electrochemiluminescent sensing strategy for this target. This shows the importance of native MS, in combination with other techniques, to thoroughly understand the aptamer-target interactions in the development of a designed application. |
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UA @ admin @ c:irua:178116 |
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8517 |
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Ysebaert, T. |
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Modelling and experimental validation of deposition on vegetation to facilitate urban particulate matter mitigation |
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Doctoral thesis |
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2023 |
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xxvi, 234 p. |
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Doctoral thesis; Engineering sciences. Technology; Sustainable Energy, Air and Water Technology (DuEL) |
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Exposure to air pollution, such as particulate matter (PM), causes adverse health effects, particularly to the respiratory tract and cardiovascular system. PM is the collective name for all kinds of particles ranging from small particles and liquid droplets, which contain organic compounds, acids and metals, to soil or dust particles. One distinguishes PM10, PM2.5 and PM0.1, which have aerodynamic particle sizes smaller than 10, 2.5 and 0.1 µm, respectively. It is mainly the latter that is the most harmful, as PM0.1 penetrates deep into the respiratory system and carries relatively more toxic substances than the other PM fractions. Over a 15-year period, PM concentrations in European member states have fallen by about 30%. Nevertheless, the World Health Organisation (WHO) air quality guidelines, which became stricter in 2021, are exceeded in most places around the world. Particularly in cities, excessive levels of PM are measured and it is here that PM mitigation should be investigated. For this, the implementation of urban green infrastructure, including trees, shrubs, green roofs and green walls, is being looked at. Plants hinder airflow and remove PM from the air by deposition on their leaves and branches. This process is known as dry deposition. Plants can capture PM very efficiently, due to their complex structure of leaves and branches. Green walls offer significant advantages over other types of urban green infrastructure because they can grow on the huge available wall area and, because they do not hinder air circulation, as we sometimes see with trees. Green walls are believed to have a much greater, untapped potential to reduce PM pollution. However, a literature review showed that we do not know the quantitative impact of green walls and lack the tools and/or general methodology to do so. The objective of this thesis is therefore to develop a method for assessing PM removal by green walls, based on predictive models and based on relevant parameters that are experimentally determined. Computational fluid dynamics (CFD) is a numerical method to simulate airflow in complex environments such as cities. These models can also simulate the vegetation-wind interaction in detail and are interesting tools to assess the effect of green walls on PM concentrations in real environments. It is important to first study the aerodynamic effect of green walls and parameterise it correctly in CFD models. Plants decrease the wind speed and create turbulence through a combination of viscous and form drag, which are determined by the permeability (K) and drag coefficient (Cd), respectively. Wind tunnel experiments were conducted with three commonly found climbers (Hedera helix, Parthenocissus tricuspidata and Parthenocissus quinquefolia) and the variation of leaf area density was investigated for two of them. It was observed that the air resistance depended on plant species, leaf area density and wind speed. The difference between the plant species was assigned to the functional leaf size (FLS), the ratio of the largest circle within the boundaries of the leaf to the total leaf area. FLS is likely associated with other morphological characteristics of plants that, when considered collectively, provide a more comprehensive representation of leaf complexity. The pressure and velocity measurements obtained were used to optimise the permeability and drag coefficient in a CFD model. At wind speeds below 0.6 m s-1, the resistance was mainly determined by viscous drag and a larger leaf size resulted in a higher viscous drag. At wind speeds above 1.5 m s-1, form drag was dominant and the parameterised Cd decreased with increasing wind speed due to the sheltering effect of successive plant elements. The leaf area density had a significant effect on K and Cd and, is therefore an important plant parameters in CFD models. The main conclusion here is that the common practice of using a constant Cd to model the influence of plants on the air flow leads to deviations from reality. Wind tunnels are highly suitable to study the impact of green walls on PM concentration under controlled environmental conditions. For this purpose, a new wind tunnel setup was built and great attention was paid to obtaining a uniform air flow. Thus, based on CFD models, appropriate flow controllers were chosen, consisting of honeycombs and screens with different mesh sizes. New PM generation devices and measuring equipment were installed and set up appropriately. Devices were available for generating and measuring ultrafine dust (<0.1 µm, i.e. PM0.1) and fine dust (<0.3 µm, i.e. PM0.3) consisting of soot particles, and, on the other hand, fine dust with particle sizes smaller than 2.5 (PM2.5) and 10 µm (PM10) consisting of 'Arizona fine test dust'. With the new wind tunnel setup, it was possible to measure the influence of Hedera helix (common ivy), grown in a planter against a climbing aid, on the PM concentration and this was expressed by a collection efficiency, i.e. the difference in concentration in front and behind the plants normalised for the incoming concentration. The collection efficiency of H. helix depended on the particle size of the PM and wind speed. The collection efficiency decreased when the particle size increased from 0.02 to 0.2 µm and increased again for particle sizes above 0.3 µm. The collection efficiency also increased with increasing wind speed, especially for particle sizes > 0.03 µm. On the other hand, relative humidity and the type of PM (soot or dust) did not significantly affect the collection efficiency. The main objective of this study was to obtain an optimised size-resolved deposition model. Dry deposition occurs through several mechanisms, in particular gravity, diffusion, impaction and interception, and the subsequent resuspension of deposited PM back to the environment. The modelling of these mechanisms was described by \citet{Zhang2001} and \citet{Petroff2010}. The data obtained from the wind tunnel experiments allowed validating these deposition models. It was for the first time that deposition of real PM on green walls was studied. The different PM deposition mechanisms were found to be strongly dependent on particle size and wind speed. The models of \citet{Zhang2001} and \citet{Petroff2010} each matched PM concentration measurements for only certain particle sizes. Therefore, a combination of the two models was investigated and the root mean square error was lower by on average 3.5% (PM < 0.03 µm) and 46% (PM > 0.03 µm) compared to the original models at wind speeds greater than 1.5 m s-1. For wind speeds less than 1.5 m s-1, the optimised model did not differ from the original models. The optimised model was able to meet the imposed criteria for air quality models, where a correct model exhibits low deviation from measurements ('normalised mean square error' < 1.5), low bias ('fractional bias' between -0.3 and 0.3) and high R2. In comparison, the R$2$ of the optimised model was 0.57, while that of Zhang et al. (2001) and Petroff et al. (2010) was 0.23 and 0.31, respectively. The optimised model was however characterised by a high scatter, with the fraction of modeled results located within a factor of two of the measurements being lower than 50. A model study with a green façade oriented parallel to the incoming airflow showed that deposition by interception and impaction reduced remarkably, but that the orientation had no effect on deposition by Brownian diffusion. A promising green wall form for PM mitigation is the living wall system (LWS). LWS consist of supporting structures with substrate to grow plants in and can be planted with a variety of plant species. This allows to select plant species with optimal characteristics to achieve PM deposition. These characteristics refer to the macro- and microstructure of the leaves, and research has been conducted mainly on these. On the other hand, the influence of the supporting structure and substrate on PM concentrations has rarely been studied. With the new wind tunnel setup, LWS from different manufacturers were tested for their ability to capture PM. The setups were subjected for three hours to an air flow with a low PM concentration (resuspension phase) and then for three hours to an air flow to which additional PM was added (deposition phase). Some setups were able to decrease the PM concentration during both phases, while others just caused the concentration to increase. Some systems were able to reduce particulate matter concentration during both phases, namely LWS consisting of planters (-2% and -4% for PM0.1 and PM2.5, respectively) and textile cloths (-23% and -5% for PM0.1 and PM2.5, respectively). While other systems actually resulted in an increase in concentration especially LWS existing textile fabrics consisting of geotextiles (+11% for both PM fractions) and with moss as substrate (+2% and +5% for PM0.1 and PM2.5, respectively). This highlights the importance of careful selection of suspension systems to reduce particulate matter concentrations. Further research is therefore needed on the materials used in these systems in relation to their particulate content, as well as on plant development in these systems. In addition to air measurements, measurements were taken of the amount of PM deposited on the leaves and suspension system of LWS. This allowed the difference in PM resuspension and deposition between plant species to be investigated. The amount of deposited particulate matter was determined based on 'saturation isothermal remanent magnetisation' (SIRM), a measure of magnetisable particulate matter. This was possible because the added 'Arizona fine test dust' contained iron oxide. However, no significant difference was observed between the SIRM values measured before the wind tunnel experiment, after resuspension and after deposition. This suggested that the iron oxide content in the Arizona fine test dust was too low to measure a significant difference in the SIRM values on leaves after three hours. The plant species did give rise to different SIRM values ranging between 5 and 260 µ A. In particular, SIRM values above 26 µ A were observed for the plant species that were grouped due to their significantly higher accumulation of PM. 'Specific leaf area' (SLA), specifically the ratio of the one-sided 'fresh' leaf area to its dry mass, was the significant leaf characteristic. SLA correlated with leaf complexity. In particular, plant species with elongated leaves were characterized by low SLA, high FLS and high complexity and showed significantly higher SIRM values. Finally, the optimised size-resolved deposition model was also tested in an urban model to get an idea of the impact of a green wall on PM concentrations in a so-called 'street canyon'. These are narrow streets with high buildings on both sides, making air pollution more persistent. To this end, an ideal scenario was tested in which a green wall was introduced along both sides of the street over a length of about 270 m. The model result showed a decrease in PM2.5 and PM10 of 46 ± 12% and 52 ± 14%. This result is of course for a very optimal scenario where the green wall covers the entire building façades. Since this is not feasible in reality, other ways of promoting contact between green walls and polluted air can be explored. The insights obtained illustrate that the use of climbing plants can be a cost-effective and environmentally friendly solution to reduce PM concentrations. Moreover, the findings showed that models can be used to investigate the impact of green walls on PM levels. These findings fit within the broader context of designing healthy and sustainable urban environments and developing innovative solutions based on solid scientific knowledge. |
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UA @ admin @ c:irua:199439 |
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8900 |
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Neven, L. |
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Singlet oxygen-based photoelectrochemical detection of phenolic contaminants |
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Doctoral thesis |
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2022 |
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234 p. |
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Doctoral thesis; Antwerp Electrochemical and Analytical Sciences Lab (A-Sense Lab) |
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Phenolic compounds can be found everywhere in our daily lives but exhibit high toxicity, low (bio)degradability and hormone-disrupting effects when they are released in the environment. It is for this reason imperative to develop detection strategies for these pollutants. A promising approach involves the use of a photoelectrochemical (PEC) sensor. In this sensor, a photosensitiser (PS) type II, which generates 1O2 under illumination, is used to oxidise phenolic compounds present in the sample. The oxidised phenols are reduced at the electrode surface leading to the generation of an electrocatalytic redox cycle. In this thesis, an in-depth understanding, through the identification of the reactive oxygen species (ROS) in the PEC sensing mechanism, is obtained. The detection strategy is optimised by choosing the PS with the highest 1O2 production and by optimising the detection parameters so that the PEC sensor can be successfully applied for the detection of phenols in industrial samples. First, it was determined that the use of highly fluorinated zinc phthalocyanine derivatives, F52PcZn and F64PcZn, as photocatalysts was optimal for the sensing of phenol due to their high 1O2 production and improved single-site isolation. However, next to 1O2, it was shown that the ROS O2•- and H2O2 were also generated in the PEC sensor. Their contribution to the photocurrent response was studied by rotating disk electrode measurements in function of the pH and applied potential. After this, the PEC detection strategy was optimised in terms of pH and applied potential for the detection of doxycycline, cefadroxil, and phenol. It was found that the use of alkaline pH-levels led to nmol L-1-level detection limits. The combination with square wave voltammetry (SWV) was, also, proposed to allow the quantification and identification of phenolic compounds in a specific sample. At last, the developed PEC and SWV sensors were applied for the measurement of phenolic compounds in industrial water samples. The PEC sensor could follow the decrease of the phenolic concentration throughout the wastewater treatment process while the SWV sensor provided the electrochemical fingerprints of these samples. The thesis concluded that the use of the PEC sensor was advantageous in the measurement of lower concentrated phenolic samples due to its high sensitivity and fast measurement time in comparison to commercial test kits. |
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UA @ admin @ c:irua:187029 |
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8932 |
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Wang, J. |
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Plasma catalysis : study of CO2 reforming of CH4 in a DBD reactor |
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Doctoral thesis |
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2022 |
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XVI, 232 p. |
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Doctoral thesis; Engineering sciences. Technology; Laboratory of adsorption and catalysis (LADCA); Plasma Lab for Applications in Sustainability and Medicine – Antwerp (PLASMANT) |
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The plasma-based dry reforming in a dielectric barrier discharge (DBD) reactor is important to achieve sustainable goals, but many challenges remain. For example, the conversion and energy yield of DBD reactors are relatively low, and the catalysts or packing materials used in existing studies cannot improve them, possibly due to the unsuitable properties and structures of catalysts or packing materials for plasma processes. In order to study the effect of catalyst structure on plasma-based dry reforming, a controllable synthesis of the catalyst supports or templates was explored. In Chapter 2, an initially immiscible synthesis method was proposed to synthesize uniform silica spheres, which can replace the organic solvent-based Stöber method to successfully synthesize silica particles with the same size ranges as the original Stöber process without addition of organic solvents. Using the silica spheres as templates, 3D porous Cu and CuO catalysts with different pore sizes were synthesized in Chapter 3 to study the effect of catalyst pore size on the plasma-catalytic dry reforming. In most cases, the smaller the pore size, the higher the conversion of CH4 and CO2 due to the reaction of radicals and ions formed in the plasma. An exception are the samples synthesized from 1 μm silica, which show better performance due to the electric field enhancement for pore sizes close to the Debye length. Besides the pore size, the particle diameter of the catalyst or packing is also one of the important factors affecting the interaction between plasma and catalyst. In Chapter 4, SiO2 spheres (with or without supported metal) were used to study the effect of different support particle sizes on plasma-based dry reforming. We found that a uniform SiO2 packing improves the conversion of plasma-based dry reforming. The conversion of plasma-based dry reforming first increases and then decreases with increasing particle size, due to the balance between the promoting and hindering effect of the particle filling on the plasma discharge. Chapter 5 is to improve the design of the DBD reactor itself, in order to try to increase its low energy yield. Some stainless steel rings were put over the inner electrode rod of the DBD reactor. The presence of rings increases the local electric field, the displaced charges and the discharge fraction, and also makes the discharge more stable and with more uniform intensity. The placement of the rings improves the performance of the reactor at 30 W supplied power. |
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UA @ admin @ c:irua:194045 |
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7273 |
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Author |
De Backer, J. |
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Title |
The versatile nature of cytoglobin, the Swiss army knife among globins, with a preference for oxidative stress |
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Doctoral thesis |
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2023 |
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XVIII, 232 p. |
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Doctoral thesis; Pharmacology. Therapy; Plasma Lab for Applications in Sustainability and Medicine – Antwerp (PLASMANT); Proteinscience, proteomics and epigenetic signaling (PPES) |
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Since its discovery 20 years ago, many studies have been performed to gain insight into the functional role of cytoglobin (Cygb). However, Cygb has been proven to be a promiscuous protein. Yet, there is a consensus that Cygb is a cytoprotective protein involved in redox homeostasis. CYGB is a ubiquitously expressed hexacoordinated globin that is highly expressed in melanocytes and is often found to be downregulated during melanocyte-to-melanoma transition. In Chapter III, we investigated the molecular mechanism through which CYGB could be involved in redox regulation. Here, we showed that CYGB contains two redox-sensitive cysteine residues and that the formation of an intramolecular disulfide bridge resulted in the heme group becoming more accessible to external ligands. This supports the hypothesis that Cys38 and Cys83 serve as sensitive redox sensors. In Chapter IV we showed that CYGB mRNA and protein levels were elevated upon exposure to hypoxia. Interestingly, this upregulation was most likely HIF-2α-dependent. We propose that in melanoma, HIF-2α, rather than HIF-1α, positively regulates CYGB under hypoxic conditions in a cell type specific way. In Chapter V, the cytotoxic effect of indirect NTP treatment in two melanoma cell lines with divergent endogenous CYGB expression levels was investigated. We confirmed that NTP endows cytotoxicity that induces cell death through apoptosis and that this was mediated through the production of ROS. Moreover, we showed that CYGB protects melanoma cells from ROS-induced apoptosis by the scavenging of ROS. Interestingly, CYGB expression influenced the expression of NRF2 and HO-1. We identified the lncRNA MEG3 as a possible mechanism through which NRF2 expression and its downstream target HO-1 can be regulated by CYGB. In chapter VI, increased basal ROS levels and higher degree of lipid peroxidation upon RSL3 treatment contributed to the increased sensitivity of CYGB knockdown G361 cells to ferroptosis. Furthermore, transcriptome analysis demonstrates the enrichment of multiple cancer malignancy pathways upon CYGB knockdown, supporting a tumor-suppressive role for CYGB. Remarkably, CYGB expression regulation was identified as a critical determinant of the ferroptosis–pyroptosis therapy response. This suggests that CYGB is involved in the regulation of multiple modes of programmed cell death. FInally, we sought to delineate the RONS that are responsible for plasma-induced ICD. Our results highlight the importance of the short-lived species. Furthermore, we are first to demonstrate that NTP-created vaccine is safely prepared and offers complete protection. Moreover, we provide conclusive evidence that direct application of NTP induces ICD in melanoma. |
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UA @ admin @ c:irua:193568 |
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7277 |
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Author |
Milagres de Oliveira, T. |
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Title |
Three-dimensional characterisation of nanomaterials : from model-like systems to real nanostructures |
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Doctoral thesis |
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2020 |
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230 p. |
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Doctoral thesis; Electron microscopy for materials research (EMAT) |
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Most recent IF: NA |
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UA @ admin @ c:irua:170020 |
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6627 |
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Horemans, B. |
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Title |
Chemical characterization of particulate air pollutants : case studies on indoor air quality, cultural heritage and the marine environment |
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Doctoral thesis |
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2012 |
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229 p. |
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Doctoral thesis; AXES (Antwerp X-ray Analysis, Electrochemistry and Speciation) |
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no |
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UA @ admin @ c:irua:94360 |
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7649 |
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Author |
Gielis, J. |
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Title |
The geometrical beauty of plants |
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MA3 Book as author |
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2017 |
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229 p. |
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MA3 Book as author; Engineering sciences. Technology; Sustainable Energy, Air and Water Technology (DuEL) |
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2017-06-01 |
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978-94-6239-150-5; 978-94-6239-151-2 |
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no |
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UA @ admin @ c:irua:144554 |
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7997 |
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Author |
Hellemans, K. |
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Title |
Laser ablation ICP-MS as a tool for surface analysis in comparison to other elemental analysis methods |
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Doctoral thesis |
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2019 |
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229 p. |
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Doctoral thesis; AXES (Antwerp X-ray Analysis, Electrochemistry and Speciation) |
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Dit onderzoek presenteert een overzicht van de mogelijkheden van LA-ICP-MS als een techniek voor kwantitatieve analyse, bepalen van isotoopverhoudingen en elementaire beeldvorming. Hiervoor wordt de techniek zelf voorgesteld en worden de belangrijkste parameters die een invloed hebben op de kwaliteit van een LA-ICP-MS meting beschreven. Voor kwantitieve analyse worden de huidige calibratiestrategieën voor LA-ICP-MS toegelicht, zowel op het vlak van selectie en bereiding van standaarden als op het vlak van dataverwerking. Daarnaast werd een nieuwe calibratiestrategie voorgesteld, gebaseerd op een lineaire combinatie van standaarden. Een case study met de traditionele calibratiestrategie uit de literatuur werd uitgevoerd en vergeleken met data van SEM-EDX om een referentiekader te schetsen voor de performantie van de techniek. In een tweede case study werd onze nieuwe calibratiestrategie toegepast en werd er uitsluitend gebruik gemaakt van LA-ICP-MS, wat uitstekende resultaten opleverde. Met het oog op het bepalen van isotoopverhoudingen, werd er onderzocht wat de limieten zijn van het gebruik van een lage resolutie quadrupool massaspectrometer voor deze bepaling. Dit stelde ons in staat om de te verwachten accuraatheid en precisie in te schatten. De performantie bleek goed genoeg te zijn om weapon-grade plutonium te onderscheiden van global fall-out, zoals het werd aangetoond in de case study omtrent dit onderwerp. Uiteindelijk hebben we ook LA-ICP-MS geëvalueerd als een techniek voor elementaire beeldvorming, waarbij we tevens de meest courante multivariate data analyse hebben beschreven. Om de techniek te plaatsen tegenover andere elementaire technieken, werd een historisch verffragment geanalyseerd dat in het verleden reeds geanalyseerd was met SEM-EDX and μ-XRD. Op die manier konden we de resultaten accuraat vergelijken met de andere technieken. |
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UA @ admin @ c:irua:160063 |
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8152 |
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Mychinko, M. |
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Title |
Advanced Electron Tomography to Investigate the Growth and Stability of Complex Metal Nanoparticles = Geavanceerde Elektronentomografie om de Groei en Stabiliteit van Complexe Metallische Nanodeeltjes te Onderzoeken |
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Doctoral thesis |
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2024 |
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227 p. |
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Doctoral thesis; Electron microscopy for materials research (EMAT) |
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During the past decades, metallic nanoparticles (NPs) have attracted great attention in materials science due to their specific optical properties based on surface plasmon resonances. Because of these phenomena, plasmonic NPs (or nanoplasmonics) are very promising for application in biosensing, photocatalysts, medicine, data storage, solar energy conversion, etc. Currently, colloidal synthesis techniques enable scientists to routinely produce mono and bimetallic NPs of various shapes, sizes, composition, and elemental distribution, with superior properties for plasmonic applications. Two primary directions for further advancing nanoplasmonic-based technologies include synthesizing novel morphologies, such as highly asymmetric chiral NPs, and gaining deeper insights into the factors affecting the stability of produced nanoplasmonics. With the increasing complexity of nanoplasmonics morphologies and higher stability requirements, there is a pressing need for thorough investigations into their 3D structures and their evolution under different conditions, with high resolution. Electron tomography (ET) emerges as an ideal tool to retrieve shape and element-sensitive information about individual nanoparticles in 3D, achieving resolutions down to the atomic level. Moreover, ET techniques can be combined with in situ holders, enabling detailed studies of processes mimicking real applications of nanoplasmonic-based devices. The first part of this thesis will focus on detailed studies of chiral Au NPs, promising for spectroscopy techniques based on the differential absorption of left- and right-handed circularly polarized light. Specifically, I will discuss the primary strategies for wet-colloidal growth of the various types of intrinsically chiral Au NPs. Advanced ET methods will be demonstrated as powerful tools for characterizing the final helical morphologies of the produced Au NPs and for studying the chiral growth mechanisms by examining intermediate structures obtained during chiral growth. The second part will focus on the heat-induced stability of various Au@Ag core-shell NPs. Operating in real conditions, such as elevated temperatures, may cause particle reshaping and redistribution of metals between the core and shell, gradually altering nanoplasmonics properties. Hence, a thorough understanding of the influence of size, shape, and defects on these processes is crucial for further developments. Recently developed techniques, combining fast ET with in-situ heating holders, have allowed me to evaluate the influence of various parameters (size, shape, defect structure) on heat-induced elemental redistribution in Au@Ag core-shell nanoparticles qualitatively and quantitatively. Additionally, I will discuss the prospects of high-resolution ET for visualizing the diffusion of individual atoms within complex nanostructures. |
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Most recent IF: NA |
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UA @ admin @ c:irua:202976 |
Serial |
9001 |
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Author |
Penders, A.G. |
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Title |
Microstructural investigation of irradiation assisted stress corrosion cracking mechanisms based on focused ion beam analysis of tested and industrial specimens |
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Doctoral thesis |
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2022 |
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xxxviii, 226 p. |
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Doctoral thesis; Engineering sciences. Technology; Electron microscopy for materials research (EMAT) |
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Irradiation assisted stress corrosion cracking (IASCC) is an intergranular cracking effect which can occur in heavily irradiated internal structural components of nuclear reactor cores. It is a complex phenomenon which is not yet fully understood because it occurs through an interplay of several material degradation processes. The factors that influence IASCC susceptibility include irradiation damage (neutrons and other irradiation particles stemming from the nuclear fission reaction), the operating temperature of the nuclear reactor, water corrosion, operating stresses, and the composition of materials susceptible to IASCC. Such materials are typically fabricated from austenitic stainless steels because of their relatively high strength, ductility, and fracture toughness. However, besides excellent metallurgical and corrosion resistant qualities, the operating conditions may still cause severe material degradation and component failure, which is extremely important for nuclear power plant safety and lifetime managements. Despite much accumulated data in the literature, both crack initiation and crack propagation mechanisms still need to be further elucidated. To that end, a probabilistic fracture model entitled the subcritical crack propagation (SCP) was recently developed, which assumes that the oxidized part of stainless steel in front of the crack plays an essential role in the crack initiation and crack propagation in sample failures. Still, despite a very good agreement with experimental observations, the SCP model but also other contemporary models favoured within the literature, require further experimental verification to what concerns the investigation of (IA)SCC. To that end, the main objective of this doctorate was to utilize experimental instrumentations like SEM, FIB-SEM and (S)TEM to conduct the investigation of the crack initiation and propagation processes in both tested and industrial specimens. Some of the investigated materials were retrieved within a nuclear reactor and are thus considered as unique test material to investigate the material degradation processes relevant for cracking. Other specimens were tailor-made to simulate the cracking processes of irradiated materials in otherwise un-irradiated materials. The newly acquired experimental results in this doctorate help rationalize existing models and methodologies used in the literature to analyse the IASCC failures of structural materials of reactor components. These results also facilitate in the development of predictive methodologies and mitigation strategies towards IASCC cracking and provide more information on IASCC from a microstructural perspective. |
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UA @ admin @ c:irua:192431 |
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7323 |
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Author |
Van der Donck, M. |
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Excitonic complexes in transition metal dichalcogenides and related materials |
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Doctoral thesis |
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2019 |
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224 p. |
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Doctoral thesis; Condensed Matter Theory (CMT) |
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Most recent IF: NA |
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UA @ admin @ c:irua:162525 |
Serial |
5412 |
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Goossenaerts, C.H.; Verbueken, A.H.; Jacob, W.A.; Van Praag, H.J.; Van Grieken, R.E. |
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A microanalytical study of green and necrotic needle tissue |
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1987 |
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224-234
T2 - Direct effects of dry and wet deposit |
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H3 Book chapter; AXES (Antwerp X-ray Analysis, Electrochemistry and Speciation) |
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no |
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UA @ admin @ c:irua:117533 |
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8237 |
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Gao, J.; Huang, W.; Gielis, J.; Shi, P. |
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Plant morphology and function, geometric morphometrics, and modelling : decoding the mathematical secrets of plants |
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2023 |
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224 p. |
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ME3 Book as editor; Sustainable Energy, Air and Water Technology (DuEL) |
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Delve into the diverse aspects of plant morphology, their responses to global climate change, and the spatiotemporal dynamics of forest productivity. Join us on a journey through the intricate web of plant characteristics and their impact on the environment. |
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2024-01-02 |
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978-3-0365-9422-4; 978-3-0365-9423-1 |
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UA @ admin @ c:irua:201545 |
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9073 |
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Maciel de Menezes, R. |
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Skyrmionics and magnonics in chiral ferromagnets : from micromagnetic to atomistic control |
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2021 |
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222 p. |
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Doctoral thesis; Condensed Matter Theory (CMT) |
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The precise control of skyrmionics and magnonics in magnetic materials is key to the development of novel spin-based technology and information transport applications. Essentially, the inherent stability of magnetic skyrmions (provided by their topological charge) together with their extremely small size (down to a few nanometers) and the ultralow threshold current necessary to move them in nanostructures are the main advantages of skyrmionics. Not least, magnonics offers lower power consumption compared to electronics and the excitation of high frequency (sub-100~nm wavelength) magnons makes it possible for the creation of nanometric devices for ultrafast information transport. Even though extensive research has been carried out in recent years, the precise manipulation of skyrmions and spin waves (magnons) in nanostructures is not fully mastered and needs to be addressed before making functional skyrmionic and magnonic devices. In this thesis, we reveal multiple alternatives for the manipulation of skyrmions and spin-waves in different materials, such as bulk chiral magnets, heterochiral structures, magnet-supperconductor hybrids and two-dimentional magnetic materials. We make use of a multiscale model to numerically simulate the magnetic states at each considered material, from micromagnetic to atomistic control. We first explore the different nucleation mechanisms, activation energy, and the time evolution of the skyrmion formation in chiral magnetic films, crucial for the realization of skyrmion-based devices. We show that the skyrmion lattice is formed from the conical phase progressively, most probably by the formation of chiral bobbres, followed by the cylindrical growth of individual skyrmions from the film surface. That reflects a rod-like (one-dimensional) nucleation of the skyrmion phase, with an activation barrier of several electronvolts per skyrmion for the case of MnSi (Manganese monosilicide). In addition, we reveal the interesting blinking (creation-annihilation) behavior of skyrmions close to the phase boundary between the conical and skyrmion phases, where we recall that such switching between topologically distinct states has been proposed as a bit operation for information storage. Next, we discuss the motion of ferromagnetic and antiferromagnetic skyrmions in heterochiral magnets. We report the characteristic deflection of ferromagnetic skyrmions when moving across a heterochiral interface, where the extent of such deflection is tuned by the applied spin-polarized current and the magnitude of Dzyaloshinskii-Moriya interaction. Following, we show that the antiferromagnetic skyrmion achieves much higher velocities than its ferromagnetic counterpart, yet experiences far stronger confinement in nanoengineered heterochiral tracks, which reinforces antiferromagnetic skyrmions as a favorable choice for skyrmion-based devices. After that, we study the interesting coupling of magnetic skyrmions and superconducting vortices in magnet-superconductor heterostructures. We perform numerical simulations, based on experimental observations, to demonstrate that the stray field of magnetic skyrmions can nucleate antivortices in an adjacent superconducting film, giving rise to a hybrid topological object, the skyrmion-vortex pair, which harbor promising features for skyrmionics and quantum computing applications. We then explore the manipulation of a single skyrmion-vortex pair when currents are applied into both superconducting and magnetic parts of the heterostructure, which is of importance for the facilitated skyrmion guidance in racetrack applications. Afterwards, we make use of the high tunability of magnetic parameters in two-dimensional magnetic materials to reveal the rich phase diagram of exotic magnetic configurations in magnetic monolayers with suppressed nearest-neighbour exchange, where we show that several unique cycloidal, checkerboard, row-wise and spin-ice states are stabilized by the competition between the second-nearest-neighbor exchange, Dzyaloshinskii-Moriya, and dipolar interactions. Additionally, we show the coexistence of ferromagnetic and antiferromagnetic spin-cycloids, as well as novel types of skyrmions and chiral domain walls. Finally, in the last part of the thesis, we present the spin wave properties in the two-dimensional magnetic materials CrBr$3$ and CrI$3$. Using spin-dynamics simulations parametrized from first principles, we reveal that the spin wave dispersion in such materials can be tuned in a broad range of frequencies by strain-engineering, and that a designed pattern of strain, as well as structural defects (halide vacancies) can be turned useful in the design of spin-wave guides. Lastly, we discuss the realization of magnonic crystals by moiré-periodic modulation of magnetic parameters in van der Waals heterostructures, where we show that the several nanometer small periodicities in such samples are ideal for the interference of terahertz spin waves. Recalling the wide range of possibilities for manipulating spin waves in such two-dimensional materials, we therefore suggest these systems as a front-runner for prospective terahertz magnonic applications. |
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UA @ admin @ c:irua:184244 |
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7019 |
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Author |
Peeters, F.M.; Shi, J.M.; Devreese, J.T. |
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Title |
Magneto-optics of shallow impurities in superlattices |
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H1 Book chapter |
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1993 |
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221-237 |
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H1 Book chapter; Condensed Matter Theory (CMT); Theory of quantum systems and complex systems |
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Kluwer |
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Dordrecht |
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A1993BA34C00020 |
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0000-00-00 |
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3 |
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UA @ lucian @ c:irua:5789 |
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1904 |
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Author |
Biondo, O. |
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Towards a fundamental understanding of energy-efficient, plasma-based CO<sub>2</sub> conversion |
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Doctoral thesis |
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2023 |
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221 p. |
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Doctoral thesis; Plasma Lab for Applications in Sustainability and Medicine – Antwerp (PLASMANT) |
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Plasma-based CO2 conversion is worldwide gaining increasing interest. The aim of this work is to find potential pathways to improve the energy efficiency of plasma-based CO2 conversion beyond what is feasible for thermal chemistry. To do so, we use a combination of modeling and experiments to better understand the underlying mechanisms of CO2 conversion, ranging from non-thermal to thermal equilibrium conditions. Zero-dimensional (0D) chemical kinetics modelling, describing the detailed plasma chemistry, is developed to explore the vibrational kinetics of CO2, as the latter is known to play a crucial role in the energy efficient CO2 conversion. The 0D model is successfully validated against pulsed CO2 glow discharge experiments, enabling the reconstruction of the complex dynamics underlying gas heating in a pure CO2 discharge, paving the way towards the study of gas heating in more complex gas mixtures, such as CO2 plasmas with high dissociation degrees. Energy-efficient, plasma-based CO2 conversion can also be obtained upon the addition of a reactive carbon bed in the post-discharge region. The reaction between solid carbon and O2 to form CO allows to both reduce the separation costs and increase the selectivity towards CO, thus, increasing the energy efficiency of the overall conversion process. In this regard, a novel 0D model to infer the mechanism underlying the performance of the carbon bed over time is developed. The model outcome indicates that gas temperature and oxygen complexes formed at the surface of solid carbon play a fundamental and interdependent role. These findings open the way towards further optimization of the coupling between plasma and carbon bed. Experimentally, it has been demonstrated that “warm” plasmas (e.g. microwave or gliding arc plasmas) can yield very high energy efficiency for CO2 conversion, but typically only at reduced pressure. For industrial application, it will be important to realize such good energy efficiency at atmospheric pressure as well. However, recent experiments illustrate that the microwave plasma at atmospheric pressure is too close to thermal conditions to achieve a high energy efficiency. Hence, we use a comprehensive set of advanced diagnostics to characterize the plasma and the reactor performance, focusing on CO2 and CO2/CH4 microwave discharges. The results lead to a deeper understanding of the mechanism of power concentration with increasing pressure, typical of plasmas in most gases, which is of great importance for model validation and understanding of reactor performance. |
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UA @ admin @ c:irua:197213 |
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9108 |
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Author |
Ribeiro Gomes, R. |
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Title |
The first order equations for the Ginzburg-Landau theory and the vortex states near a permalloy disk |
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Doctoral thesis |
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2018 |
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220 p. |
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Doctoral thesis; Condensed Matter Theory (CMT) |
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UA @ admin @ c:irua:152233 |
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5213 |
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Author |
Borah, R. |
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Title |
Photoactive nanostructures : from single plasmonic nanoparticles to self-assembled films |
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Doctoral thesis |
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2022 |
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xxxiv, 220 p. |
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Doctoral thesis; Engineering sciences. Technology; Sustainable Energy, Air and Water Technology (DuEL) |
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Photoactive nanoparticles and their light-driven applications have gained tremendous scientific attention towards remediation of the global environmental problems, meeting alternative energy demands, and other new technological discoveries. The research work presented in this dissertation includes a fundamental investigation of such nanoparticles to gain deeper insights that will ultimately benefit their application. In particular, the study of plasmonic metal nanoparticles and metal oxide nanoparticles for light driven applications is the major theme of this work. The investigation begins with isolated plasmonic Au and Ag nanoparticles, followed by a natural extension to nanoparticle clusters, and then further to nanoparticle films. Next, the application of such plasmonic nanoparticle films for gaseous phase sensing of volatile organic compounds is explored. Finally, the film formation of metal-oxide nanoparticles by self-assembly is investigated for the fabrication of photoactive functional interfaces. The fundamental theoretical investigation of the isolated plasmonic nanoparticles encompasses alloy and core-shell nanostructures of Au-Ag bimetallic compositions. First, the optical properties of bimetallic alloy and core-shell nanoparticles are compared for different structures such as nanospheres, nanotriangles and nanorods. Based on the optical properties, the photothermal properties of these nanostructures are also evaluated for relevant light-driven applications. Further, to bridge the gap between the theoretical and experimental optical properties of colloidal plasmonic nanoparticles, the effect of different statistical parameters pertaining to the particle size distribution is studied. Going from isolated nanoparticles to nanoparticle clusters, the changes in the optical properties of plasmonic nanoparticles when they form finite clusters is investigated. A strong effect of clustering on the absorption intensities of the nanoparticles and hence, on the photothermal properties is found. Next, for the study of plasmonic nanoparticle infinite arrays, Au and Ag nanoparticles films are experimentally obtained by the self-assembly at the air-ethylene glycol interface. Upon further validation of the computational models with the experimental optical properties of these films, the near-field and far-field optical response of the plasmonic nanoparticle arrays is investigated. An application of the self-assembled Au nanoparticle film is then demonstrated in the sensing of volatile organic compounds (VOCs). Finally, the focus is shifted from plasmonic nanoparticles to metal oxide nanoparticles for their self-assembly at the air-water interface to obtain self-assembled films. For this, the hydrophobic functionalization of four metal oxides nanoparticles namely, TiO2, ZnO, WO3 and CuO is investigated. The insights from this work is useful for the design and fabrication of functional nanoparticles and interfaces for light driven applications. |
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UA @ admin @ c:irua:189155 |
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7188 |
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Vincze, L.; Vekemans, B.; Szaloki, I.; Brenker, F.E.; Falkenberg, G.; Rickers, K.; Aerts, K.; Van Grieken, R.; Adams, F. |
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X-ray fluorescence microtomography and polycapillary based confocal imaging using synchrotron radiation |
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P1 Proceeding |
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2004 |
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220-231
T2 - 4th Conference on Developments in X-R |
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P1 Proceeding; AXES (Antwerp X-ray Analysis, Electrochemistry and Speciation) |
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Ibis work illustrates the development of X-ray fluorescence tomography and polycapillary based confocal imaging towards a three-dimensional (313), quantitative analytical method with lateral resolution levels down to the 2-20 mum scale. Detailed analytical characterization is given for polycapillary based confocal XRF imaging, which is a new variant of the 3D micro-XRF technique. Applications for 2D/3D micro-XR-F are illustrated for the analysis of biological (zooplankton) and geological samples (microscopic inclusions in natural diamonds and fluid inclusions in quartz). Based on confocal imaging, fully three-dimensional distributions of trace elements could be obtained, representing a significant generalization of the regular 2D scanning technique for micro-XRF spectroscopy. The experimental work described in this paper has been carried out at the ESRF ID18F microfluorescence end-station and at HASYLAB Beam Line L. |
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000225665000023 |
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2004-11-02 |
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UA @ admin @ c:irua:94812 |
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8767 |
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Rodrigues Lavor, I. |
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Plasmons and electronic transport in two-dimensional materials |
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Doctoral thesis |
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2021 |
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219 p. |
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Doctoral thesis; Condensed Matter Theory (CMT) |
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This thesis presents, in its first part, an investigation on the trembling motion of wave packets known as zitterbewegung (ZBW), in multilayer graphene, as well as in moiré excitons in twisted MoS2/WSe2 hetero-bilayers. In the last few decades, the dynamics of wave packets has been subject of many theoretical and experimental studies in various types of systems such as semiconductors, superconductors, crystalline solids and cold atoms. The discovery of graphene and moiré excitons in twisted hetero-bilayers, brought two new platforms for the investigation on time evolution of wave packets and possible observation of ZBW. This trembling motion was first theoretically predicted by Schrödinger for wave packets describing particles that obey the Dirac equation. This is exactly the case of low energy electrons in graphene, as well as of moiré exciton in twisted MoS2/WSe2 under an external applied electromagnetic field. ZBW in multilayer graphene was studied both analytically and computationally, respectively, through the Green's function and split-operator methods. In this system, it is found that ZBW depends not only on the wave packet width and initial pseudospin polarization, but also on the number of layers. Furthermore, the analytical and numerical methods proposed here allow to investigate wave packet dynamics in graphene systems with an arbitrary number of layers and arbitrary potential landscapes. For moiré excitons in twisted MoS2/WSe2 hetero-bilayers, it is shown that, analogously to other Dirac-like particles, this system also exhibits ZBW when under a perpendicular applied field. In this case, the ZBW presents long timescales that are compatible with current experimental techniques for exciton dynamics. This promotes the study of the dynamics of moiré excitons in van der Waals heterostructures as an advantageous solidstate platform to probe zitterbewegung, broadly tunable by gating and inter-layer twist angle. In the second part of this thesis, a study into graphene plasmonic in van der Waals heterostructure (vdWhs) are treated in a linear response framework within the Random Phase Approximation and with support of the quantum electrostatic heterostructure (QEH), a DFT-based method. Since Dirac plasmons in graphene are very sensitive to the dielectric properties of the environment, it is possible to explore this property to probe the structure and composition of van der Waals heterostructures (vdWh) placed underneath a single graphene layer. In this way, one can achieve a layer sensitivity of a single layer and differentiate between different TMDs for heterostructures thicker than 2 layers. As a consequence of this, study, the hybridization of Dirac plasmons in graphene with phonons of transition metal dichalcogenides (TMDs), when the materials are combined in so-called van der Waals heterostructures (vdWh) forming surface plasmon-phonon polaritons (SPPPs) are also investigated. It was found that it is possible to realize both strong and ultrastrong coupling regimes by tuning graphene’s Fermi energy and changing TMD layer number. |
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UA @ admin @ c:irua:181012 |
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7011 |
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Magalhães Cunha, S. |
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Wave-packet dynamics and electronic transport properties in 2D materials |
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Doctoral thesis |
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2022 |
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219 p. |
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Doctoral thesis; Condensed Matter Theory (CMT) |
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This piece of work is twofold. First, the time evolution of wave-packets in 2D systems is analyzed by the Split-Operator technique in three different scenarios: in multilayer phosphorene, the transient oscillations in the time-dependent average of position and momentum were observed due to the zitterbewegung effect, and the wave packet propagates non-uniformly along the space deforming itself into an elliptical shape. These results were corroborated by the Green’s function formalism except for large values of the wave-vector and long times; in 2D semiconductor quantum wires (QWs) with anisotropic effective masses and different angle orientations with respect to the anisotropic axis. We have shown that the greater this angle, the smaller is the energy levels spacing implying in an increase of the accessible electronic states. Additionally, for non-null magnetic field, the quantum Hall edge states are significantly affected by the edge orientation. In the anisotropic case damped oscillations in the average values of velocity in both x and y directions where obtained. Theses oscillations are originated by the QW geometry but also from subwavepackets with different momentum orientations, whereas for isotropic QWs the wavepacket disperses without splitting; in the third scenario the split-operator technique was used to study the Landau levels, the wave packet trajectories and velocities of electrons in graphene at low-energy regime described by a modified Dirac equation where the momentum-operator is written in a generalized form as result of applying the position-dependent translation operator formalism (PDTO). In the second part of this thesis, the electronic and tunneling properties of α − T3 lattices were studied. Electrons in these lattices behave analogous to integer-spin Dirac Fermions. The presence of a third atomic site in the unit cell leads to a flat band in the energy spectrum, providing unique electronic and tunneling properties. The presence of a super-periodic potential and the inclusion of symmetry-breaking terms results in deviations of the atomic equivalence between the atomic sites affecting the Dirac points and the band-gap. Small deviations in the equivalence between the atomic sites and the number of barriers change the transmission properties in these lattices. Additionally, new tunneling regions are possible by adjusting the symmetry between the atomic sites and affect the omnidirectional total transmission called super-Klein tunneling observed in these lattices. We compare those results to the tunneling probabilities through regions where the energy spectrum changes from linear with a middle flat band to a hyperbolic dispersion. |
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UA @ admin @ c:irua:189191 |
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7227 |
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Thiruvottriyur Shanmugam, S. |
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Singlet oxygen-based photoelectrochemical detection of nucleic acids |
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Doctoral thesis |
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2022 |
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217 p. |
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Doctoral thesis; Engineering sciences. Technology; Antwerp Electrochemical and Analytical Sciences Lab (A-Sense Lab) |
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MicroRNAs (miRNAs) are small oligonucleotides (18-25 bases) that play a key role in epigenetic regulation. Since the discovery of miRNAs in 1993, their role in biological processes has been extensively investigated. By now, it has been evidenced that monitoring and detection of miRNAs can improve (early) disease diagnosis. The existing diagnostic approaches have limitations such as the need for complex multistep protocols for sample preparation, analysis, data interpretation, high cost of equipment, the need for highly qualified personnel, and high laboratory standards. As opposed to this, point-of-care biosensors and chips aim to facilitate the procedure and avoid sending samples into centralized laboratories, which saves time, reduces the chance of sample degradation, and enables analysis of patient samples in remote areas, directly at home or primary and secondary care facilities (i.e. general practitioners and specialists). The latter is essential for therapy assessment and follow-up monitoring of patients with chronic diseases and cancer. Nevertheless, the development of such sensors is lagging compared to the projections of 10 – 20 years ago, mainly due to insufficient sensitivity, poor reproducibility, and the complexity of the sensors’ design reported in the research literature. This motivates the development of new detection strategies and technologies such as photoelectrochemical sensors that combine the best features of different sensing approaches. The primary concern when developing detection technologies for miRNA is the need for a highly sensitive and selective platform. This thesis explores a novel photoelectrochemical (PEC) method that is distinctive owing to its sensitive nature and simple and robust design. Firstly, we focused on the usage of recently emerging commercial gold-sputtered electrode systems for the detection of short nucleic acid with enzymatic amplification. Importantly, cleaning such electrodes is a challenge since the standard procedures known for regular disk electrodes such as polishing cannot be employed here, since it will damage the protective layer on the electrode. However, the electrodes can be washed and pretreated chemically and/or electrochemically. Thus, a procedure to effectively clean and modify the gold-sputtered electrode has been developed, resulting in high-performance gold-sputtered nucleic acid sensors. Next, the usage of molecular photosensitizers as an alternative to enzymatic amplification has been evaluated. We took advantage of the singlet oxygen production by photosensitizers upon photoexcitation, leading to a photocurrent response due to the singlet oxygen-induced (electro)chemical conversions. Following the demonstration of the detection strategy, the analytical performance of the sensing system was evaluated using magnetic beads-based nucleic acid assay on disposable electrode platforms, with a focus to enhance the sensitivity and robustness of the technique in detecting complementary nucleic acid targets. Following the fundamental evaluation of the singlet oxygen-based PEC detection of nucleic acids, we further optimized the assay and measurement parameters and employed the sensing strategy for a polymerase chain reaction-free (PCR-free) quantification of miRNAs related to prostate cancer. By successfully detecting and quantifying low-picomolar range concentrations (< 10 pM) in plasma samples from prostate cancer patients, we successfully showed the applicability of the novel sensing strategy. We have also compared and positioned the performance of our developed PEC strategy with an existing state-of-art technique, i.e. electrochemiluminescence (ECL). Our PEC strategy performed on par with ECL, both yielding low-picomolar detection limits in serum matrices, however quicker and cheaper than ECL. Owing to the versatility of this PEC technique, the final study explored its multiplexing capability. As a starting point in this branch of the research, we have investigated two possible ways for multiplexing. To perform multiple measurements at the same time, constructing calibration plots and quantifying unknown miRNA concentrations in patient samples at the same time, we have developed a high-throughput detection with 96X multi-channel electrode systems and in-house designed and constructed 96XLED illumination sources. Secondly, to detect more than one target miRNA in a single measurement, intra-vial multiplexing where the samples were analyzed for different targets in one vial was also explored. Altogether, this thesis presents the fundamentals, development and application of a novel PEC strategy for detecting short (< 25 bases) nucleic acid sequences, in particular, miRNA. With an aim to serve as a distinctive technique to function as a clinical testing platform without any need for PCR, this work adds value to the development of nucleic acid-based sensors for miRNAs and other short-stranded nucleic acid biomarkers, and benefits in the early detection of diseases like cancer. |
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UA @ admin @ c:irua:191753 |
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8931 |
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Einhäupl, P. |
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Landfill mining : implementing the missing link to a circular economy: an evaluation of the societal sustainability |
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Doctoral thesis |
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2021 |
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xxiii, 216 p. |
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Doctoral thesis; Economics; Engineering sciences. Technology; Engineering Management (ENM) |
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One of the main objectives of implementing a circular economy system is the reuse and recycling of resources. Closing material cycles and renewable-based electricity and fuel production are essential to such systems. To achieve a high degree of circularity, waste streams have to be rethought and integrated from a cradle-to-grave to a cradle-to-cradle approach. However, today’s circular economy strategies mostly focus on current waste streams, while past waste streams, buried in landfills, could play an important role when recovering resources and energy. Hence, a well-thought-out circular economy strategy should include the re-integration of past waste streams. A grave-to-cradle approach is needed. Landfill mining (LFM), i.e. the excavation and processing of formerly buried waste to energy and materials, aims at utilizing these past waste streams. Doing so could bear potential economic, environmental, and societal burdens and benefits. Originating from landfill remediation projects, landfill mining has been further developed towards resource recovery. Today, using up-to-date technologies and following the most stringent environmental and social criteria, the concept is also known as enhanced landfill mining (ELFM). Throughout the relevant scientific literature, most attention is given to advances in technological development for (E)LFM, as well as its techno-economic and environmental assessment. Societal assessments of LFM projects are rare and treat societal impacts only selectively or from unilateral societal perspectives. If stakeholders are included in societal (E)LFM assessments, only industrial actors, like landfill operators, and governmental actors are asked to participate. A holistic stakeholder assessment for (E)LFM is missing. Moreover, the diverse societal impacts – ranging from socio-environmental benefits through the mitigation of health risks, over socio-economic benefits through land reclamation, and social benefits through community engagement, for example – are either only studied selectively or evaluated as one, entangling various societal effects. A holistic and specific assessment of societal factors affecting (E)LFM implementation is also missing. This thesis uses an anticipatory approach to tackle these challenges. This approach aims to integrate stakeholder values and include uncertainty through the use of multiple social perspectives and prospective modeling tools. In-depth interviews were conducted to develop a typology of (E)LFM stakeholders and to elicit the most important stakeholder needs. Stakeholders were selected along an extended quadruple helix framework, including industrial, institutional, scientific, and community actors. Furthermore, using system dynamics tools, namely causal loop diagrams, societal systems of (E)LFM could be visualized and analyzed. Finally, a discrete choice experiment was conducted to evaluate a set of societal factors representing the conversion of a landfill into a public park for recreational use. The in-depth interviews included landfill operators, technology providers and incubators, local governments and governmental institutions, as well as researchers and community members. To structure the diverse perspectives of stakeholders on (E)LFM, five stakeholder archetypes were developed: The Entrepreneur, the Engaged Citizen, the Visionary, the Technology Enthusiast, and the Skeptic. The archetypes capture important characteristics and opinions approaching (E)LFM implementation. They differ in risk perceptions, knowledge base, influence on (E)LFM’s systemic and project implementation, and their main concerns and motivations. Furthermore, 18 stakeholder needs were derived from the interviews. This includes societal, environmental, regulatory, and techno-economic needs. The needs are put in relation to the affected stakeholders and sustainability dimensions. Uncertainties that could potentially be reduced through the fulfillment of each need are qualitatively assessed. Quantitatively, stakeholders were focusing on societal, regulatory, and techno-economic needs, whereas qualitative emphasis was given to environmental needs, especially the avoidance of impacts from primary resource production. When meeting stakeholder needs fairly, intra- and inter-dimensional trade-offs have to be considered as different perspectives can lead to different and sometimes contradicting implications for (E)LFM implementation. To conceptualize societal systems of (E)LFM, causal loop diagrams were developed following system dynamics methodology. The visualizations show how (E)LFM is embedded in its societal context. Variables comprising the societal impact were analyzed, and mechanisms affecting the public project acceptance and the market acceptance of (E)LFM products worked out. Leverage points were identified, helping (E)LFM practitioners and policymakers to minimize potential risks and maximize potential benefits. To these count technological choices, stakeholder involvement, the after-use, quality standards, and LFM regulation in general, amongst others. To disentangle and evaluate societal impacts of (E)LFM, a discrete choice experiment was conducted deriving the utility of five distinct attributes: the size of a landfill, the project duration, job creation, disamenities, and climate impacts. To determine the willingness to pay, perform scenario analysis, and model policy simulations, a sixth attribute was added representing a cost factor for project implementation. Environmental considerations are most important to the sample, while project duration and disamenities also play a significant role. The scenario analysis and policy simulations show that taxing households for (E)LFM implementation is a viable option, especially for environmentally beneficial projects. Nonetheless, a favorable combination of the remaining attributes can compensate utility losses for environmentally questionable projects. As risks of classical landfill management practices are likely to grow with an updated evaluation of after-care periods lasting up to 100 years and more, positive effects of (E)LFM become even more noteworthy. Nonetheless, (E)LFM projects also pose potential risks like groundwater contamination or the reintroduction of hazardous materials. If executed poorly, (E)LFM projects could potentially do more harm than good. A mix of policy measures is recommended to push a major part of potential (E)LFM projects from being environmentally beneficial and economically inefficient to being societally, environmentally, and economically favorable. Overall, more research is necessary to integrate (E)LFM into circular economy strategies and build a sensible grave-to-cradle approach. |
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Most recent IF: NA |
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UA @ admin @ c:irua:181007 |
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6935 |
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Author |
Kovács, A. |
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A structured methodology for natural deep eutectic solvent selection and formulation for enzymatic reactions |
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Doctoral thesis |
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2023 |
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viii, 216 p. |
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Doctoral thesis; Engineering sciences. Technology; Plasma Lab for Applications in Sustainability and Medicine – Antwerp (PLASMANT); Biochemical Wastewater Valorization & Engineering (BioWaVE); Intelligence in PRocesses, Advanced Catalysts and Solvents (iPRACS) |
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Natural deep eutectic solvents (NADES) show great promise as media for enzymatic reactions in areas where (bio)compatibility with natural or medicinal products is a must. While in theory they can be tailored to the intended reaction to ensure optimized yields, the knowledge to date is predominantly empirical, with some mechanistic reports providing a fragmented view at best. Therefore, it is not easy to explain experimental observations, let alone make predictions. The aim of this study was to develop a structured, holistic understanding of the effects of NADES media on enzymatic reactions, distinguishing between effects on solubility, solvation, viscosity, inhibition and denaturation. Experimental and computational chemistry methods were combined to separately study the interactions between enzyme, substrate, and NADES as reaction media. The initial enzyme activity and the final conversion of vinyl laurate transesterification by immobilized Candida antarctica lipase were studied experimentally. The direct effect of NADES on the same enzyme was modeled by molecular dynamics simulation. The effect of solubility was studied by both experimental and computational methods. To predict the solubility and viscosity of NADES, data-driven models were developed by combining group contribution and machine learning methods, based on the accumulated experimental knowledge on NADES found in the literature. Finally, the composed relationships and prediction models were applied to the practical example of deacetylation of mannosylerythritol lipids (MELs). The experimental findings show that the chosen NADES system has a significant effect on both the apparent initial activity and the final conversion. However, in the simulations, the enzyme retains its original structure; moreover, NADES has an additional stabilizing effect on the enzyme. In addition, changes in the molar ratio of the compounds in NADES do not show a significant effect on the stability of the enzyme. These results indicate that the main effect of NADES on the reaction is mainly related to the substrate-solvent interactions (solvation energy) and the viscosity of the system. On the other hand, the experimental results only confirmed the significance of solvation, viscosity did not show a clear correlation with the studied reaction parameters. The machine learning models built for solubility and viscosity gave quantitative predictions of these properties. The accumulated knowledge was used to optimize the yield in the deacetylation reaction of MELs. The combination of these methods provides fundamental knowledge about the effect of NADES on biocatalysis, but the results are also applicable to other uses of NADES. |
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Most recent IF: NA |
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UA @ admin @ c:irua:194886 |
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7276 |
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