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Author |
Agrawal, S.; Weissbrodt, D.G.; Annavajhala, M.; Jensen, M.M.; Arroyo, J.M.C.; Wells, G.; Chandran, K.; Vlaeminck, S.E.; Terada, A.; Smets, B.F.; Lackner, S. |
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Title |
Time to act–assessing variations in qPCR analyses in biological nitrogen removal with examples from partial nitritation/anammox systems |
Type |
A1 Journal article |
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Year  |
2021 |
Publication |
Water Research |
Abbreviated Journal |
Water Res |
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Volume |
190 |
Issue |
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Pages |
116604 |
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Keywords |
A1 Journal article; Sustainable Energy, Air and Water Technology (DuEL) |
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Abstract |
Quantitative PCR (qPCR) is broadly used as the gold standard to quantify microbial community fractions in environmental microbiology and biotechnology. Benchmarking efforts to ensure the comparability of qPCR data for environmental bioprocesses are still scarce. Also, for partial nitritation/anammox (PN/A) systems systematic investigations are still missing, rendering meta-analysis of reported trends and generic insights potentially precarious. We report a baseline investigation of the variability of qPCR-based analyses for microbial communities applied to PN/A systems. Round-robin testing was performed for three PN/A biomass samples in six laboratories, using the respective in-house DNA extraction and qPCR protocols. The concentration of extracted DNA was significantly different between labs, ranged between 2.7 and 328 ng mg−1 wet biomass. The variability among the qPCR abundance data of different labs was very high (1−7 log fold) but differed for different target microbial guilds. DNA extraction caused maximum variation (3–7 log fold), followed by the primers (1–3 log fold). These insights will guide environmental scientists and engineers as well as treatment plant operators in the interpretation of qPCR data. |
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Wos |
000632807700001 |
Publication Date |
2020-11-05 |
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ISSN |
0043-1354; 1879-2448 |
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Additional Links |
UA library record; WoS full record; WoS citing articles |
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Impact Factor |
6.942 |
Times cited |
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Open Access |
OpenAccess |
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Notes |
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Approved |
Most recent IF: 6.942 |
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Call Number |
UA @ admin @ c:irua:173838 |
Serial |
8672 |
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Author |
Zhang, Q.; Vlaeminck, S.E.; DeBarbadillo, C.; Su, C.; Al-Omari, A.; Wett, B.; Pümpel, T.; Shaw, A.; Chandran, K.; Murthy, S.; De Clippeleir, H. |
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Title |
Supernatant organics from anaerobic digestion after thermal hydrolysis cause direct and/or diffusional activity loss for nitritation and anammox |
Type |
A1 Journal article |
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Year |
2018 |
Publication |
Water research |
Abbreviated Journal |
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Volume |
143 |
Issue |
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Pages |
270-281 |
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Keywords |
A1 Journal article; Engineering sciences. Technology; Sustainable Energy, Air and Water Technology (DuEL) |
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Abstract |
Treatment of sewage sludge with a thermal hydrolysis process (THP) followed by anaerobic digestion (AD) enables to boost biogas production and minimize residual sludge volumes. However, the reject water can cause inhibition to aerobic and anoxic ammonium-oxidizing bacteria (AerAOB & AnAOB), the two key microbial groups involved in the deammonification process. Firstly, a detailed investigation elucidated the impact of different organic fractions present in THP-AD return liquor on AerAOB and AnAOB activity. For AnAOB, soluble compounds linked to THP conditions and AD performance caused the main inhibition. Direct inhibition by dissolved organics was also observed for AerAOB, but could be overcome by treating the filtrate with extended aerobic or anaerobic incubation or with activated carbon. AerAOB additionally suffered from particulate and colloidal organics limiting the diffusion of substrates. This was resolved by improving the dewatering process through an optimized flocculant polymer dose and/or addition of coagulant polymer to better capture the large colloidal fraction, especially in case of unstable AD performance. Secondly, a new inhibition model for AerAOB included diffusion-limiting compounds based on the porter-equation, and achieved the best fit with the experimental data, highlighting that AerAOB were highly sensitive to large colloids. Overall, this paper for the first time provides separate identification of organic fractions within THP-AD filtrate causing differential types of inhibition. Moreover, it highlights the combined effect of the performance of THP, AD and dewatering on the downstream autotrophic nitrogen removal kinetics. (C) 2018 Elsevier Ltd. All rights reserved. |
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000443664000027 |
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2018-06-18 |
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0043-1354; 1879-2448 |
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UA library record; WoS full record; WoS citing articles |
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no |
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Call Number |
UA @ admin @ c:irua:152911 |
Serial |
8623 |
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Author |
Zhang, Q.; Vlaeminck, S.E.; DeBarbadillo, C.; Suzuki, R.; Kharkar, S.M.; Al-Omari, A.; Wett, B.; Chandran, K.; Murthy, S.; De Clippeleir, H. |
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Title |
Startup strategies of deammonification reactors treating reject water from thermally hydrolyzed solids |
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P3 Proceeding |
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Year |
2017 |
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5 p.
T2 - WEFTEC.17, 30 September 4 October 2017, |
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Keywords |
P3 Proceeding; Engineering sciences. Technology; Sustainable Energy, Air and Water Technology (DuEL) |
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no |
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Call Number |
UA @ admin @ c:irua:151113 |
Serial |
8579 |
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Author |
Zhang, Q.; Higgins, M.J.; Vlaeminck, S.E.; DeBarbadillo, C.; Suzuki, R.; Kharkar, S.M.; Al-Omari, A.; Wett, B.; Chandran, K.; Murthy, S.; De Clippeleir, H. |
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Title |
Minimizing recalcitrant organics and maximizing nitrogen removal linked to advanced biosolids processing at Blue Plains WWTP |
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P3 Proceeding |
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Year |
2017 |
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12 p.
T2 - IWA 2017 Conference on Sustainable Wast |
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P3 Proceeding; Engineering sciences. Technology; Sustainable Energy, Air and Water Technology (DuEL) |
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no |
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Call Number |
UA @ admin @ c:irua:151107 |
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8252 |
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Author |
Zhang, Q.; De Clippeleir, H.; Shaw, A.; DeBarbadillo, C.; Su, C.; Al-Omari, A.; Wett, B.; Chandran, K.; Vlaeminck, S.E.; Murthy, S. |
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Title |
Mechanistic understanding of microbial activity inhibition : case study on sidestream deammonification for digester supernatant pretreated by thermal hydrolysis |
Type |
P3 Proceeding |
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Year |
2016 |
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5 p.
T2 - WEF/IWA Nutrient Removal and Recovery Co |
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Keywords |
P3 Proceeding; Engineering sciences. Technology; Sustainable Energy, Air and Water Technology (DuEL) |
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Call Number |
UA @ admin @ c:irua:151133 |
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8214 |
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Zhang, Q.; De Clippeleir, H.; DeBarbadillo, C.; Su, C.; Al-Omari, A.; Wett, B.; Chandran, K.; Vlaeminck, S.E.; Murthy, S. |
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Title |
Inhibition mechanisms affecting deammonification of dewatering filtrate from thermally hydrolyzed digested solid |
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P3 Proceeding |
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Year |
2016 |
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9 p.
T2 - WEFTEC.16, 24 - 28 September 2016, New O |
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Keywords |
P3 Proceeding; Engineering sciences. Technology; Sustainable Energy, Air and Water Technology (DuEL) |
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Call Number |
UA @ admin @ c:irua:151123 |
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8102 |
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